Jonathan Tedds

Honorary Fellow (Health Sciences + Physics and Astronomy)

CONTACT DETAILS

Department of Health Sciences
Centre for Medicine, Lancaster Road, University of Leicester, Leicester LE1 7RH

Tel: +44 (0)794 122 1362

Email: jat26@le.ac.uk

(From 1.4.18) ELIXIR Europe Life Sciences Compute Platform Coordinator at ELIXIR Europe Hub, Cambridge

Twitter: @jtedds; LinkedIn; ResearchGate; ORCID

RESEARCH INTERESTS

Health, Astrophysics and Research Data Informatics

• Leading, researching, developing, implementing BRISSKit and integrated open source biomedical research software solutions across a range of public health, environmental health and multi-disciplinary research challenges. Use cases include the 100k Genomes Project with University Hospitals Leicester NHS Trust and Genomics England; NIHR funded Leicester Cardiovascular, Respiratory and Leicester-Loughborough Lifestyle Biomedical Research Units; Leicester Cancer Research Biobank; environmental health research involving aerosols with the Leicester Earth Observation Science group; National Centre for Sports and Exercise Medicine at Loughborough and a key collaboration with the D2K Data to Knowledge research group in the School of Community Medicine at the University of Bristol for the ALSPAC longitudinal birth cohort studies and the DataShield statistical analysis tool. Chair of Medilink East Midlands Digital Health Special Interest Group.
• Managing research data including multi disciplinary, environmental heatlh and sensitive health research data both as a researcher and at the strategic and institutional support level at Leicester and having worked with Jisc, Digital Curation Centre, Wellcome Trust including the HEFCE UK Research Data Service (UKRDS) Feasibility Study, the Jisc funded HALOGEN multi disciplinary research database in support of Wellcome Trust funded Roots of the British research and a range of national and international use cases.
• Publishing and Peer Review of Research Data online and via Data Journals. I led the Jisc funded PREPARDE project, co-founded the international Data Publication mailing list, Co-chair the international Research Data Alliance RDA-WDS Publishing Data Group and I'm Editor-in-Chief of Open Health Data Journal.
• Astronomical Survey Science, Informatics & Dynamical Interactions in Star Forming Regions including near-IR spectroscopic and multi wavelength studies, the XMM-Newton Survey Science Centre, International Virtual Observatory Alliance and Gamma Ray Bursts. I worked in particular on the XID ground-based identification program of the XMM X-ray Serendipitous Survey, led at Leicester on behalf of the European Space Agency community of astronomers. I was the UK representative on the Internal Science Team and managed the UK participation in the European Virtual Observatory Data Centre Alliance, an EC funded FP6 project which enabled European and other data centres to publish their archives to the Virtual Observatory. I was part of the science team for the UK AstroGrid Virtual Observatory project, whose innovate and ground breaking research data infrastructure has been implemented and adapted worldwide.

RESEARCH PROJECTS

Current and recently active projects include:

• Principal Investigator: BRISSKit integrated open source biomedical research software (Jisc/HEFCE and user funded, currenty deployed in support of 100k Genomes Programme in UHL NHS Trust). What is BRISSKit?

  Please see our short animated explainer below which gives an accessible overview of the platform and why it could be of use to you or your researchers!

   

  • Principal Investigator: 100k Genomes Programme Informatics R&D + ongoing support to University Hospitals Leicester NHS Trust, East of England GMC.
  • Principal Investigator: PREPARDE research data publishing and peer review (previously Jisc funded)
  • Co-Supervisor: NERC Knowledge Exchange Research Fellow on Aerosols and Health

  PROFESSIONAL ACTIVITIES

  • Editor in Chief: Open Health Data Journal (Ubiquity Press)
  • Chair: Medilink East Midlands Digital Health Special Interest Group
  • President: UK chapter of International Society of Digital Medicine
  • Honorary Senior Research Fellow, Data2Knowledge Research Group, School of Community Medicine, University of Bristol (2016-17)
  • Biosharing Advisory Board Member: community standards for life sciences
  • Co-Chair: Research Data Alliance-WDS Publishing Data Interest Group and affiliated Working Groups
  • Associate Editor: Geoscience Data Journal Open Access (Wiley)
  • Associate Editor: International Journal of Digital Curation (Edinburgh)
  • UK Environmental Observation Framework Data Advisory Group Member
  • University of Leicester Committees: RIAG - Research Infrastructure Advisory Group; RIAG Research Data Management Working Group; previously University Ethics Committee (non NHS)
  • UoL College of Medical Biological and Psychological Sciences Committee membership: College Research Committee; Research Implementation Group; Big Data and Information Governance Working Group
  • International Astronomical Union Commission Member for Data Science Groups in: Documentation and Astronomical Data, Astroinformatics and Astrostatistics; Computational Astrophysics
  • Honorary Research Fellow in the X-Ray and Observational Astronomy research group, Department of Physics and Astronomy (Leicester)
  • Alumnus Research Fellow of the Royal Commission for the Great Exhibition of 1851
  • Voluntary Activities: I am Chair of Trustees for the Oadby Wigston Leics Schools Trust (elected 2015) & Chair of Governors at a large, outstanding Primary School since 2007.

  POSTGRADUATE SUPERVISION AND TEACHING

  • Co-supervision of NERC Knowledge Exchange Research Fellow in Aerosols and Health: Dr Josh vande Hey, Department of Physics & Astronomy, University of Leicester

  HIGHLIGHTED INVITED LECTURES, BLOG

  • University of Reading Invited Lecture at Open in Practice event (Mar 2017): "Journeys in reproducible research and challenges for institutions, disciplines and the individual"
  • Medilink East Midlands Digital Health SIG (Mar 2016): "Digital health research software at the NHS research interface in Leicester and beyond"
  • FOSTER EU Training Event (April 2015): “Successfully using research data management principles”
  • DLab UC Berkeley Distinguished Lecture (Sep 2013): “The open research challenge: peer review and publication of research data”
  • Jisc blog (Jan 2015): “How technology-enabled data sharing could aid medical research”
  • Institutional Research Data Management Invited Video (University of Glasgow, 2012): "What support needs to be provided to assist researchers with data management?"

  SELECTED PUBLICATIONS

  More complete listings and links to articles via ResearchGate but selected articles below:

  Health And Environmental Research Data Informatics

  • Cookies, fake news and single search boxes: the role of A and I services in a changing research landscape Megan Toogood,Jonathan A. Tedds(2017), Institution of Engineering and Technology White Paper
  • UK Environmental Observation Framework Data Advisory Group Advice Note 5: Big Data and Data from Sensors Jonathan A. Tedds (Ed.), Mike Brown, Phil Kershaw, Dom Lethem, Ben Wright (2017), UKEOF Data Advisory Group Advice Note, No.5
  • DataSHIELD – New Directions and Dimensions Rebecca C. Wilson, Oliver W. Butters, Demetris Avraam, James Baker, Jonathan A. Tedds, Andrew Turner, Madeleine Murtagh, Paul R. Burton (2017), Data Science Journal. 16, p.21
  • The Biomedical Research Infrastructure Software as a Service Kit (BRISSKit): Technical Description Oliver Butters, Shajid Issa, Jeff Lusted, Malcolm Newbury, Russ Parsloe, Nick Holden, Rob Free, Tim Beck, Rececca Wilson, Paul Burton, Jonathan Tedds (PI), 2016, F1000Research 2016, 5:1905
  • Persistent Identification and Citation of Software Catherine M. Jones, Brian Matthews, Ian Gent, Tom Griffin, Jonathan Tedds; 2016, International Journal of Digital Curation Vol 11, Issue 2
  • Key components of data publishing: using current best practices to develop a reference model for data publishing Claire C. Austin, Theodora Bloom, Sünje Dallmeier-Tiessen, Varsha Kumari Khodyar, Fiona Murphy, Amy Nurnburger, Lisa Raymond, Martina Stockhause, Jonathan Tedds, Mary Vardigan, Angus Whyte; Int J Digit Libr (2016). doi:10.1007/s00799-016-0178-2
  • Peer Review of Datasets: When, Why, and How Matthew S Mayernik, Sarah Callaghan, Roland Leigh, Jonathan Tedds, Steven Worley, 2015, Bulletin of the American Meteorological Society DOI: 10.1175/BAMS-D-13-00083.1
  • Guidelines on Recommending Data Repositories as Partners in Publishing Research Data Sarah Callaghan, Jonathan Tedds, John Kunze,Varsha Khodiyar, Rebecca Lawrence, Matthew Mayernik, Fiona Murphy, Timothy Roberts, Angus Whyte; 2014. The International Journal of Digital Curation. 02/2014; 9(1):152-163
  • Cross-Linking Between Journal Publications and Data Repositories: A Selection of Examples Sarah Callaghan, Jonathan Tedds, Rebecca Lawrence, Fiona Murphy, Timothy Roberts, Wilcox Wiley; International Journal of Digital Curation. 02/2014; 9(1):164-175
  • Processes and Procedures for Data Publication: A Case Study in the Geosciences Sarah Callaghan, Fiona Murphy, Jonathan Tedds, Rob Allan, John Kunze, Rebecca Lawrence, Matthew S. Mayernik, Angus Whyte; International Journal of Digital Curation. 06/2013; 8(1):193-203
  • Guidelines, Policies and Procedures for Data Publication from the PREPARDE project Murphy, Fiona; Callaghan, Sarah; Tedds, Jonathan; Khodiyar, Varsha; Kunze, John; Lawrence, Rebecca; Mayernik, Matthew; Roberts, Timothy; Whyte, Angus. EGU General Assembly 2014, held 27 April - 2 May, 2014 in Vienna, Austria, id.5225
  • Gathering evidence of benefits: a structured approach from the Jisc Managing Research Data programmeLaura Molloy, Simon Hodson, Meik Poschen,Jonathan Tedds International Journal of Digital Curation. 01/2013; 8(2).
  • BRISSKit Biomedical Research Infrastructure Software - Overview Nov 2012 Jonathan Tedds, Oliver Butters, Nick Holden, Malcolm Newbury, Neil Beagrie, Daphne Charles, Shajid Issa, Debadutt Goswami, Andrew Burnham, Somaraja Surampudi, Chris Greengrass, Robert Free, Tim Beck, Paul Burton, Anthony Brookes, Alison Goodall, Nilesh Samani, Gavin Whyman, Tim Skelton
  • University of Leicester Research Data Roadmap, June 2012 Andrew Burnham, Jonathan Tedds
  • Making the Case for Research Data Management Angus Whyte,Jonathan Tedds Digital Curation Centre - Jisc Briefing Paper. September 2011;

  Astrophysics and Astro Informatics

  • The UKIRT Hemisphere Survey: definition and J-band data release
    S. Dye A. Lawrence M. A. Read X. Fan T. Kerr W. Varricatt K. E. Furnell A. C. EdgeM. Irwin N. Hambly

    P. Lucas O. Almaini K. Chambers R. Green P. Hewett M. C. LiuI. McGreer W. Best Z. Zhang E. Sutorius D. Froebrich E. Magnier G. HasingerS. M. Lederer M. Bold J. A. Tedds
    Monthly Notices of the Royal Astronomical Society, Volume 473, Issue 4, 1 February 2018, Pages 5113–5125
  • X-ray Selected BALQSOs M.J. Page, F.J. Carrera, M. Ceballos, A. Corral, J. Ebrero, P. Esquej, M. Krumpe, S. Mateos, S. Rosen, A. Schwope, A. Streblyanska,
    M. Symeonidis, J.A. Tedds, M.G. Watson, 2016, Monthly Notices of the Royal Astronomical Society, accepted 4 October 2016
  • The XMM-Newton Wide Angle Survey (XWAS) P. Esquej, M. Page, F. J. Carrera, S. Mateos, J. Tedds, M. G. Watson, A. Corral, J. Ebrero, M. Krumpe, S. R. Rosen, M. T. Ceballos, A. Schwope, C. G. Page, A. Alonso-Herrero, A. Caccianiga, R. Della Ceca, O. Gonzalez-Martín, G. Lamer, P. Severgnini, 2013, Astronomy & Astrophysics Vol 557, 123
  • The Herschel ATLAS S. Eales, L. Dunne, D. Clements, A. Cooray, G. de Zotti,S. Dye, R. Ivison, M. Jarvis, G. Lagache, S. Maddox, [......], J.A. Tedds, P. Temi, R. Tuffs, M. Trichas, M. Vaccari, I. Valtchanov, P. van der Werf, A. Verma, J. Vieria, C. Vlahakis, G. J. White; Publications of the Astronomical Society of the Pacific 2010; 122:499-515.
  • The XMM-Newton Wide Angle Survey (XWAS): the X-ray spectrum of type-1 AGN S. Mateos, F. J. Carrera, M. J. Page, M. G. Watson, A. Corral, J. A. Tedds, J. Ebrero, M. Krumpe, A. Schwope,M. T. Ceballos 2010, Astronomy and Astrophysics  Vol 510, 25
  • The X-ray source content of the XMM-Newton Galactic plane survey C. Motch, Robert Warwick, Mark Cropper, F. J. Carrera,Patrick Guillout, M. W. Pakull, Alex Rosen, Jonathan Tedds, Natalie A. Webb, Ignacio Negueruela 2010 Astronomy and Astrophysics Vol 523, 92
  • Census of European Data Centres M. G. Allen, M. Depretz, J. Zuther, C. Arviset, J. A. Tedds, F. Genova 2009 Tech. rep., Deliverable D5 of the EuroVO-DCA project (EC FP6)
  • e-IRG Data Management Task Force Report on Data Management Contributing author: Jonathan Tedds 11/2009;
  • Science with the Virtual Observatory: the AstroGrid VO Desktop Jonathan A. Tedds 06/2009;
  • A multi-wavelength survey of AGN in the XMM-LSS field. I. Quasar selection via the KX technique Nakos, Th.; Willis, J. P.; Andreon, S.; Surdej, J.; Riaud, P.; Hatziminaoglou, E.; Garcet, O.; Alloin, D.; Baes, M.; Galaz, G.; Pierre, M.; Quintana, H.; Page, M. J.; Tedds, J. A.; Ceballos, M. T.; Corral, A.; Ebrero, J.; Krumpe, M.; Mateos, S.; Astronomy and Astrophysics, Volume 494, Issue 2, 2009, pp.579-589
  • The XMM-Newton serendipitous survey. V. The Second XMM-Newton serendipitous source catalogue Watson, M. G.; Schröder, A. C.; Fyfe, D.; Page, C. G.; Lamer, G.; Mateos, S.; Pye, J.; Sakano, M.; Rosen, S.; Ballet, J.; Barcons, X.; Barret, D.; Boller, T.; Brunner, H.; Brusa, M.; Caccianiga, A.; Carrera, F. J.; Ceballos, M.; Della Ceca, R.; Denby, M.; Denkinson, G.; Dupuy, S.; Farrell, S.; Fraschetti, F.; Freyberg, M. J.; Guillout, P.; Hambaryan, V.; Maccacaro, T.; Mathiesen, B.; McMahon, R.; Michel, L.; Motch, C.; Osborne, J. P.; Page, M.; Pakull, M. W.; Pietsch, W.; Saxton, R.; Schwope, A.; Severgnini, P.; Simpson, M.; Sironi, G.; Stewart, G.; Stewart, I. M.; Stobbart, A.-M.; Tedds, J.; Warwick, R.; Webb, N.; West, R.; Worrall, D.; Yuan, W.;
    Astronomy and Astrophysics, Volume 493, Issue 1, 2009, pp.339-373
  • Average Fe Kα emission from distant AGN Corral, A.; Page, M. J.; Carrera, F. J.; Barcons, X.; Mateos, S.; Ebrero, J.; Krumpe, M.; Schwope, A.; Tedds, J. A.; Watson, M. G.; Astronomy and Astrophysics, Volume 492, Issue 1, 2008, pp.71-80
  • High precision X-ray log N - log S distributions: implications for the obscured AGN population Mateos, S.; Warwick, R. S.; Carrera, F. J.; Stewart, G. C.; Ebrero, J.; Della Ceca, R.; Caccianiga, A.; Gilli, R.; Page, M. J.; Treister, E.; Tedds, J. A.; Watson, M. G.; Lamer, G.; Saxton, R. D.; Brunner, H.; Page, C. G.; Astronomy and Astrophysics, Volume 492, Issue 1, 2008, pp.51-69
  • VOExplorer: Visualising Data Discovery in the Virtual Observatory Tedds, J. A.; Winstanley, N.; Lawrence, A.; Walton, N.; Auden, E.; Dalla, S.; 2008, Astronomical Data Analysis Software and Systems ASP Conference Series, Vol. 394, 159
  • The cosmological properties of AGN in the XMM-Newton Hard Bright Survey Della Ceca, R.; Caccianiga, A.; Severgnini, P.; Maccacaro, T.; Brunner, H.; Carrera, F. J.; Cocchia, F.; Mateos, S.; Page, M. J.; Tedds, J. A.; Astronomy and Astrophysics, Volume 487, Issue 1, 2008, pp.119-130
  • The Soft X-Ray Blast in the Apparently Subluminous GRB 031203 Watson, D.; Vaughan, S. A.; Willingale, R.; Hjorth, J.; Foley, S.; Fynbo, J. P. U.; Jakobsson, P.; Levan, A.; O'Brien, P. T.; Osborne, J. P.; Pedersen, K.; Reeves, J. N.; Tedds, J. A.; Watson, M. G.; 2006, The Astrophysical Journal, Volume 636, Issue 2, pp. 967-970
  • The Discovery of an Evolving Dust-scattered X-Ray Halo around GRB 031203 Vaughan, S.; Willingale, R.; O'Brien, P. T.; Osborne, J. P.; Reeves, J. N.; Levan, A. J.; Watson, M. G.; Tedds, J. A.; Watson, D.; Santos-Lleó, M.; Rodríguez-Pascual, P. M.; Schartel, N.; 2004, The Astrophysical Journal, Volume 603, Issue 1, pp. L5-L8
  • The X-ray afterglow of GRB 020322 Watson, D.; Reeves, J. N.; Osborne, J. P.; Tedds, J. A.; O'Brien, P. T.; Tomas, L.; Ehle, M.; Astronomy and Astrophysics, v.395, p.L41-L45 (2002)
  • Tracing Shock Evolution in YSO Jets, 2002, Tedds, J. A.; Smith, M. D.; Fernandes, A. J. L.; Davis, C. J. RevMexAA (Serie de Conferencias) , 13 , 103–107
  • Shocked H₂ and Fe⁺ dynamics in the Orion bullets, 1999, Tedds, Jonathan A.; Brand, Peter W. J. L.; Burton, Michael G.; Monthly Notices of the Royal Astronomical Society, Volume 307, Issue 2, pp. 337-356
  • Integral Field 3D Spectroscopy in Outflows Tedds, J. A.; Brand, P. W. J. L.; Burton, M. G.; 1999, Optical and Infrared Spectroscopy of Circumstellar Matter, ASP Conference Series, Vol. 188. 73
  • Shocked Molecular Hydrogen in the Orion Bullets, 1997, Tedds, J.A. PhD Thesis, University of Edinburgh
  • The Physics of Shocked Outflows In Star Forming Molecular Clouds Tedds, Jonathan A.; Brand, Peter W. J. L.; Burton, Michael G.; Chrysostomou, Antonio; Fernandes, Amadeu J. L.; 1994, Clouds; cores and low mass stars, Astronomical Society of the Pacific Conference Series, volume 65; Proceedings of the 4th Haystack Observatory Conference; Haystack Observatory; Westford; Massachusetts; 18-20 May; 1994; San Francisco: Astronomical Society of the Pacific (ASP); |c1994; edited by Dan P. Clemens and Richard Barvainis, p.375